PROSITE - Entry: PS50310

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Entry: PS50310

General information about the entry
Entry name	ALA_RICH
Accession number	PS50310
Entry type	MATRIX
Date	APR-2002 (CREATED); APR-2002 (DATA UPDATE); APR-2002 (INFO UPDATE).
PROSITE Documentation	PDOC50099
Associated ProRule	PRU00001
Name and characterization of the entry
Description	Alanine-rich region profile.
Matrix / Profile	/GENERAL_SPEC: ALPHABET='ABCDEFGHIKLMNPQRSTVWYZ'; LENGTH=2; /DISJOINT: DEFINITION=PROTECT; N1=1; N2=2; /NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=0.9973; R2=0.17408621; TEXT='-LogE'; /CUT_OFF: LEVEL=0; SCORE=43; N_SCORE=8.5; MODE=1; TEXT='!'; /CUT_OFF: LEVEL=-1; SCORE=31; N_SCORE=6.5; MODE=1; TEXT='?'; /DEFAULT: SY_I='A'; I0=-1; M0=-1; A B C D E F G H I K L M N P Q R S T V W Y Z /M: SY='A'; M= 4, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1; /I: MI=0; IM=0; I=4,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1,-1; /M: SY='A'; M= 4, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1, -1;
Comments
MATRIX_TYPE: composition Scaling database: UniProtKB/Swiss-Prot: db_global Matrix author: P_Bucher This entry can, in some cases, be ignored by a program (because it is too unspecific). FT_KEY: COMPBIAS FT_DESC: Ala-rich VERSION: 1