Species code:	BORPE
Taxonomy:	Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella (TaxID: 520) [NEWT/ NCBI]
Description:	Bordetella pertussis is a human pathogen which colonizes the respiratory tract. It is the etiologic agent of whooping cough.
Properties:	Presence of flagella: No Interaction: Animal pathogen in Mammalia Number of membranes: 2 Number of inteins:0
Statistics:	Number of BORPE entries in the UniProt Knowledgebase: 3261 (479 in UniProtKB/Swiss-Prot + 2782 in UniProtKB/TrEMBL)

Genome structure	Chromosome EMBL accession number BX470248 (circular; 4,086,189 bp) (download entry) (download Genome Reviews).
References	[1] MEDLINE=22827954; PubMed=12910271; [ NCBI , EBI , Israel , Japan ] Parkhill J., Sebaihia M., Preston A., Murphy L.D., Thomson N.R., Harris D.E., Holden M.T.G., Churcher C.M., Bentley S.D., Mungall K.L., Cerdeno-Tarraga A.-M., Temple L., James K.D., Harris B., Quail M.A., Achtman M., Atkin R., Baker S., Basham D., Bason N., Cherevach I., Chillingworth T., Collins M., Cronin A., Davis P., Doggett J., Feltwell T., Goble A., Hamlin N., Hauser H., Holroyd S., Jagels K., Leather S., Moule S., Norberczak H., O'Neil S., Ormond D., Price C., Rabbinowitsch E., Rutter S., Sanders M., Saunders D., Seeger K., Sharp S., Simmonds M., Skelton J., Squares R., Squares S., Stevens K., Unwin L., Whitehead S., Barrell B.G., Maskell D.J. ; "Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica."; Nat. Genet. 35:32-40(2003).
Web links	Official genome site(s): http://www.sanger.ac.uk/Projects/B_pertussis/ Other web sites: CBS: http://www.cbs.dtu.dk/services/GenomeAtlas/show-genus.php?kingdom=Bacteria&GLgenus=Bordetella&GLspecies=pertussis&GLstrain=TohamaI Entrez Genome Project: http://www.ncbi.nlm.nih.gov/sites/entrez?Db=genomeprj&Cmd=DetailsSearch&Term=txid520%5Borgn%5D GIB (DDBJ): http://gib.genes.nig.ac.jp/single/index.php?spid=Bper_TOHAMA1 Karyn's Genomes: http://www.ebi.ac.uk/2can/genomes/bacteria/Bordetella_pertussis.html TIGR CMR: http://cmr.tigr.org/tigr-scripts/CMR/GenomePage.cgi?database=ntbp03 Unofficial: http://pedant.gsf.de:3345/pedant3htmlview/pedant3view?Method=start_method&Db=p3_p26_Bor_pertu  EBI Proteome Analysis page

• Genome Proximity Viewer: This program displays the genes that are found in the genomic environment of a selected locus.
  
  
• Perform a BLAST search against all proteins from this proteome
  
  
• Download a file by FTP containing all UniProt Knowledgebase entries of this proteome
  • in UniProt Knowledgebase format
  • in FASTA format
  
  
• Retrieve set of characterized or identified proteins for this proteome
  
  
• Retrieve set of proteins with 3D structure for this proteome