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| HAMAP links |
This list contains links to some microbe-specific resources. These links as well as many more are also available from
the ExPASy Life Science Directory and the
UniProtKB/Swiss-Prot Documentation.
| Bacteria |
- WDCM - World Data Center for Microorganisms
- List of Bacterial Names with Standing in Nomenclature
- List of complete bacterial proteomes in Swiss-Prot (HAMAP)
- CBS - CBS Genome Atlas Database
- CMR - TIGR Comprehensive Microbial Ressource
- GIB - Genome information broker for Microbial genomes
- GOLD Genomes On-line Database
- HOBACGEN - Homologous Bacterial Genes db
- Comparison of the transport capabilities of bacterial genomes - from Ian Paulsen
- BPGD - Bacterial polysaccharide gene db
- Bacterial quorum sensing
- MicrobeWorld - Educational site on microbes
- E.coli UniProtKB/Swiss-Prot entries, gene names and cross-references to EcoGene
- EcoWeb / EcoGene - Very comprehensive E.coli db
- ECCE - E.coli Cell Envelope Protein Data Collection
- ECDC - E.coli db collection
- EcoCyc - Encyclopedia of E.coli genes and metabolism
- EchoBASE
- GenProtEC - E.coli genome and proteome db
- Colibri - E.coli GenoList browser at Institut Pasteur
- ECGC - E.coli Genome Center at Wisconsin University
- DDBJ E.coli - E.coli home page at DDBJ
- Regulon DB
- B.subtilis UniProtKB/Swiss-Prot entries, gene names and WWW servers
- SubtiList - Bacillus subtilis GenoList browser at Institut Pasteur
- NRSub - Bacillus subtilis non-redundant db
- DBTBS - Db of B.subtilis promoters and transcription factors
- A.actinomycetemcomitans - Actinobacillus actinomycetemcomitans strain HK1651 genome project
- B.anthracis at CNBP - Bacillus anthracis strain Ames WWW site
- B.stearothermophilus - Bacillus stearothermophilus strain 10 genome project
- Bordetella species genome projects at Sanger Institute - bronchiseptica strain RB50, parapertussis strain 1822 and pertussis strain Tohama I
- BbDB - Borrelia burgdorferi B31 genome db at JCVI-CMR
- Brucella abortus strain 2308 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- Brucella abortus strain 9-941 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- Brucella melitensis strain 16M UniProtKB/Swiss-Prot entries, gene names and WWW servers
- Brucella suis strain 1330 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- B.aphidicola (subsp. Acyrthosiphon pisum) UniProtKB/Swiss-Prot entries, gene names and WWW servers
- B.aphidicola (subsp. Schizaphis graminum) UniProtKB/Swiss-Prot entries, gene names and WWW servers
- C.jejuni - Campylobacter jejuni strain NCTC 11168 genome project
- C.muridarum - Chlamydia muridarum strain MoPn genome db at JCVI-CMR
- C.pneumoniae AR39 - Chlamydia pneumoniae strain AR39 genome db at JCVI-CMR
- C.pneumoniae J138 - Chlamydia pneumoniae strain J138 genome db at JCVI-CMR
- Chromobacterium violaceum - Brazilian Genome
- C.michiganensis Claviabacter michiganensis subsp. sepdonicus genome project at Sanger Institute
- C.difficile - Clostridium difficile strain 630 genome project at Sanger Institute
- C.diphtheriae - Corynebacterium diphtheriae strain NCTC 13129 genome project at Sanger Institute
- Coxiella burnetii strain RSA 493 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- CyanoBase - The Genome Database for Cyanobacteria
- CyanoList - Synechocystis PCC6803 and Anabaena PCC7120 GenoList browser at Institut Pasteur
- DrDB - Deinococcus radiodurans strain R1 genome db at JCVI-CMR
- E.ruminantium - Ehrlichia ruminantium (formerly Cowdria ruminantium) genome project at Sanger Institute
- H.influenzae UniProtKB/Swiss-Prot entries, gene names and WWW servers
- HiDB - Haemophilus influenzae genome db at JCVI-CMR
- H.pylori UniProtKB/Swiss-Prot entries, gene names and WWW servers
- HpDB - Helicobacter pylori strain 26695 genome db at JCVI-CMR
- PyloriGene - Helicobacter pylori GenoList browser at Institut Pasteur
- L.lactis - Lactobacillus lactis subsp. lactis strain IL1403 genome db
- L.plantarum - Lactobacillus plantarum genome project
- LegioList - Legionella pneumophila Paris strain and Legionella pneumophila Lens strain GenoList browser at Institut Pasteur
- ListiList - Listeria monocytogenes and Listeria innocua GenoList browser at Institut Pasteur
- BoviList - Mycobacterium bovis strain AF2122/97 GenoList browser at Institut Pasteur
- M.bovis - Mycobacterium bovis strain AF2122/97 genome project at Sanger Institute
- Leproma - Mycobacterium leprae strain TN genome db
- M.leprae at Sanger - Mycobacterium leprae genome project at Sanger Institute
- TubercuList - Mycobacterium tuberculosis strain H37Rv GenoList browser at Institut Pasteur
- MtDB - Mycobacterium tuberculosis strain Oshkosh genome db at JCVI-CMR
- M.tuberculosis at Sanger - Mycobacterium tuberculosis strain H37Rv genome project at Sanger Institute
- M.tuberculosis structural genomics consortium
- BuruList - Mycobacterium ulcerans strain Agy99 GenoList browser at Institut Pasteur
- M.genitalium UniProtKB/Swiss-Prot entries, gene names and WWW servers
- MgDB - Mycoplasma genitalium genome db at JCVI-CMR
- M.pneumoniae UniProtKB/Swiss-Prot entries, gene names and WWW servers
- M.pneumoniae - Mycoplasma pneumoniae genome project
- MypuList - Mycoplasma pulmonis GenoList browser at Institut Pasteur
- Mycoplasma synoviae genome db - Brazilian Genome
- N.meningitidis A - Neisseria meningitidis serogroup A strain Z2491 genome project at Sanger Institute
- N.meningitidis B - Neisseria meningitidis serogroup B strain MC58 genome db at JCVI-CMR
- N.gonorrhoeae - Neisseria gonorrhoeae strain FA 1090 genome project
- N.europaea - Nitrosomonas europaea genome project
- PhotoList - Photorhabdus luminescens strain TT01 GenoList browser at Institut Pasteur
- P.marinus - Prochlorococcus marinus genome project
- P.aeruginosa project - Pseudomonas aeruginosa genome project
- R.solanacearum - Ralstonia solanacearum genome project
- Rhizobium pNGR234a UniProtKB/Swiss-Prot entries, gene names and WWW servers
- RhizoBase - The Genome Database for Rhizobia
- Rhizobium pNGR234a analysis
- RsGDB - Rhodobacter sphaeroides genome db
- R.palustris - Rhodopseudomonas palustris genome project
- RicBase - Rickettsia conorii strain Malish 7 genome project
- R.bellii strain RML369-C UniProtKB/Swiss-Prot entries, gene names and WWW servers
- R.conorii strain Malish 7 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- R.felis strain URRWXCa12 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- R.prowazekii UniProtKB/Swiss-Prot entries, gene names and WWW servers
- R.typhi strain Wilmington UniProtKB/Swiss-Prot entries, gene names and WWW servers
- S.typhi - Salmonella typhi strain CT18 genome project at Sanger Institute
- S.meliloti - Sinorhizobium meliloti genome project
- AureoList - Staphylococcus aureus strains N315 and Mu50 GenoList browser at Institut Pasteur
- S.aureus - Staphylococcus aureus strain NCTC 8325 genome project
- SagaList - Streptococcus agalactiae strain NEM316 GenoList browser at Institut Pasteur
- StreptoPneumoList - Streptococcus pneumoniae strains R6 and Tigr4 GenoList browser at Institut Pasteur
- S.mutans - Streptococcus mutans strain UAB159 genome project
- S.pyogenes M1 - Streptococcus pyogenes strain SF370 serotype M1 genome project
- S.pyogenes M5 - Streptococcus pyogenes strain Manfredo serotype M5 genome project at Sanger Institute
- S.suis - Streptococcus suis genome project at Sanger Institute
- S.uberis - Streptococcus uberis genome project at Sanger Institute
- S.coelicolor - Streptomyces coelicolor strain A3(2) genome project at Sanger Institute
- S.avermitilis - Streptomyces avermitilis strain MA-4680 genome project
- Synechocystis strain PCC 6803 UniProtKB/Swiss-Prot entries, gene names and WWW servers
- TmDB - Thermotoga maritima genome db at JCVI-CMR
- TpDB - Treponema pallidum genome db at JCVI-CMR
- T.whipplei - Tropheryma whipplei genome project at Sanger Institute
- U.urealyticum - Ureaplasma urealyticum genome WWW site
- VcDB - Vibrio cholerae genome db at JCVI-CMR
- X.fastidiosa - Xylella fastidiosa genome project
- Y.enterocolitica - Yersinia enterocolitica strain 8082 genome project at Sanger Institute
- Y.pestis at Sanger - Yersinia pestis strain CO-92 Biovar Orientalis genome project at Sanger Institute
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| UniProtKB/Swiss-Prot documents |
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