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HPI
The UniProtKB/Swiss-Prot Human Proteome Initiative |
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HPI Status report
UniProtKB/Swiss-Prot Release 56.1 of 02-Sep-2008: 397539 entries
(Release statistics)
Total number of manually annotated mammalian entries in UniProtKB/Swiss-Prot: 63,534
Total number of manually annotated HUMAN entries in UniProtKB/Swiss-Prot: 20,325
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
13,475 |
33 |
0.66 |
7,121 |
35% |
| Variants (disease mutations and polymorphisms): |
45,955 |
1305 |
2.26 |
8,960 |
44% |
| Post-translational modifications (experimentally proven or potential): |
59,236 |
303 |
2.91 |
11,202 |
55% |
| References to published articles: |
102,594 / 44,792 |
176 |
5.05 |
20,092 |
98% |
| Comment blocks: |
110,389 / 40,319 |
32 |
5.43 |
19,594 |
96% |
| Feature lines: |
475,635 |
4049 |
23.40 |
20,325 |
100% |
| Cross-references: |
| EMBL protein_ids: |
129,038 / 128,523 |
723 |
6.35 |
20,199 |
99% |
| InterPro: |
50,003 / 6,420 |
23 |
2.46 |
16,775 |
82% |
| PDB (3D-structures): |
27,250 / 25,688 |
460 |
1.34 |
3,369 |
16% |
| MIM catalog of human genes and genetic disorders: |
15,245 / 14,359 |
15 |
0.75 |
12,117 |
59% |
| HGNC gene nomenclature: |
19,031 / 18,902 |
14 |
0.94 |
18,877 |
92% |
Total number of manually annotated MOUSE entries in UniProtKB/Swiss-Prot: 15,915
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
7,191 |
20 |
0.45 |
4,265 |
26% |
| Variants (disease mutations and polymorphisms): |
1,160 |
37 |
0.07 |
361 |
2% |
| Post-translational modifications (experimentally proven or potential): |
49,243 |
216 |
3.09 |
9,480 |
59% |
| References to published articles: |
46,594 / 17,309 |
49 |
2.93 |
15,674 |
98% |
| Comment blocks: |
79,647 / 31,730 |
22 |
5.00 |
15,549 |
97% |
| Feature lines: |
244,549 |
612 |
15.37 |
15,915 |
100% |
| Cross-references: |
| EMBL protein_ids: |
67,737 / 67,685 |
111 |
4.26 |
15,777 |
99% |
| InterPro: |
40,907 / 6,251 |
18 |
2.57 |
13,897 |
87% |
| PDB (3D-structures): |
4,550 / 4,255 |
224 |
0.29 |
867 |
5% |
| Mouse Genome Informatics: |
15,748 / 15,682 |
12 |
0.99 |
15,696 |
98% |
Total number of manually annotated RAT entries in UniProtKB/Swiss-Prot: 7,170
| Annotation categories |
counts [total / unique] |
max per entry |
average per entry |
number of entries |
coverage |
| Additional isoforms due to alternative splicing, initiation or promoter usage: |
1,367 |
18 |
0.19 |
767 |
10% |
| Variants (disease mutations and polymorphisms): |
238 |
12 |
0.03 |
113 |
1% |
| Post-translational modifications (experimentally proven or potential): |
25,050 |
204 |
3.49 |
4,777 |
66% |
| References to published articles: |
14,945 / 9,279 |
25 |
2.08 |
6,744 |
94% |
| Comment blocks: |
36,747 / 17,524 |
24 |
5.13 |
7,032 |
98% |
| Feature lines: |
105,182 |
314 |
14.67 |
7,170 |
100% |
| Cross-references: |
| EMBL protein_ids: |
14,629 / 14,614 |
152 |
2.04 |
7,095 |
98% |
| InterPro: |
19,534 / 4,587 |
19 |
2.72 |
6,460 |
90% |
| PDB (3D-structures): |
2,598 / 2,480 |
116 |
0.36 |
389 |
5% |
| Rat Genome Database: |
7,050 / 7,030 |
3 |
0.98 |
7,045 |
98% |
For more detailed information about the taxonomic distribution of UniProtKB/Swiss-Prot
entries, see the corresponding section in the Release
statistics.
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