[1]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND CHARACTERIZATION.
STRAIN=K12;
PubMed=8112305 [NCBI, ExPASy, EBI, Israel, Japan]
Mazel D.,
Pochet S.,
Marliere P.;
"Genetic characterization of polypeptide deformylase, a distinctive enzyme of eubacterial translation.";
EMBO J. 13:914-923(1994).
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[2]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=K12 / K37;
PubMed=1624424 [NCBI, ExPASy, EBI, Israel, Japan]
Guillon J.-M.,
Mechulam Y.,
Schmitter J.-M.,
Blanquet S.,
Fayat G.;
"Disruption of the gene for Met-tRNA(fMet) formyltransferase severely impairs growth of Escherichia coli.";
J. Bacteriol. 174:4294-4301(1992).
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[3]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / MG1655 / ATCC 47076;
DOI=10.1126/science.277.5331.1453; PubMed=9278503 [NCBI, ExPASy, EBI, Israel, Japan]
Blattner F.R.,
Plunkett G. III,
Bloch C.A.,
Perna N.T.,
Burland V.,
Riley M.,
Collado-Vides J.,
Glasner J.D.,
Rode C.K.,
Mayhew G.F.,
Gregor J.,
Davis N.W.,
Kirkpatrick H.A.,
Goeden M.A.,
Rose D.J.,
Mau B.,
Shao Y.;
"The complete genome sequence of Escherichia coli K-12.";
Science 277:1453-1474(1997).
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[4]
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NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K12 / W3110 / ATCC 27325 / DSM 5911;
DOI=10.1038/msb4100049; PubMed=16738553 [NCBI, ExPASy, EBI, Israel, Japan]
Hayashi K.,
Morooka N.,
Yamamoto Y.,
Fujita K.,
Isono K.,
Choi S.,
Ohtsubo E.,
Baba T.,
Wanner B.L.,
Mori H.,
Horiuchi T.;
"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.";
Mol. Syst. Biol. 2:E1-E5(2006).
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[5]
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NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-16.
STRAIN=K12 / K37;
PubMed=8432722 [NCBI, ExPASy, EBI, Israel, Japan]
Meinnel T.,
Guillon J.-M.,
Mechulam Y.,
Blanquet S.;
"The Escherichia coli fmt gene, encoding methionyl-tRNA(fMet) formyltransferase, escapes metabolic control.";
J. Bacteriol. 175:993-1000(1993).
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[6]
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CHARACTERIZATION.
PubMed=7896716 [NCBI, ExPASy, EBI, Israel, Japan]
Meinnel T.,
Blanquet S.;
"Enzymatic properties of Escherichia coli peptide deformylase.";
J. Bacteriol. 177:1883-1887(1995).
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[7]
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COFACTOR.
DOI=10.1006/bbrc.1998.8616; PubMed=9610360 [NCBI, ExPASy, EBI, Israel, Japan]
Groche D.,
Becker A.,
Schlichting I.,
Kabsch W.,
Schultz S.,
Wagner A.F.;
"Isolation and crystallization of functionally competent Escherichia coli peptide deformylase forms containing either iron or nickel in the active site.";
Biochem. Biophys. Res. Commun. 246:342-346(1998).
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[8]
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STRUCTURE BY NMR.
DOI=10.1006/jmbi.1996.0521; PubMed=8845003 [NCBI, ExPASy, EBI, Israel, Japan]
Meinnel T.,
Blanquet S.,
Dardel F.;
"A new subclass of the zinc metalloproteases superfamily revealed by the solution structure of peptide deformylase.";
J. Mol. Biol. 262:375-386(1996).
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[9]
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STRUCTURE BY NMR.
DOI=10.1006/jmbi.1998.1882; PubMed=9665852 [NCBI, ExPASy, EBI, Israel, Japan]
Dardel F.,
Ragusa S.,
Lazennec C.,
Blanquet S.,
Meinnel T.;
"Solution structure of nickel-peptide deformylase.";
J. Mol. Biol. 280:501-513(1998).
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[10]
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X-RAY CRYSTALLOGRAPHY (2.9 ANGSTROMS).
DOI=10.1021/bi9711543; PubMed=9374869 [NCBI, ExPASy, EBI, Israel, Japan]
Chan M.K.,
Gong W.,
Rajagopalan P.T.R.,
Hao B.,
Tsai C.M.,
Pei D.;
"Crystal structure of the Escherichia coli peptide deformylase.";
Biochemistry 36:13904-13909(1997).
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[11]
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ERRATUM.
Chan M.K.,
Gong W.,
Rajagopalan P.T.R.,
Hao B.,
Tsai C.M.,
Pei D.;
Biochemistry 37:13042-13042(1998).
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[12]
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X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS).
DOI=10.1074/jbc.273.19.11413; PubMed=9565550 [NCBI, ExPASy, EBI, Israel, Japan]
Becker A.,
Schlichting I.,
Kabsch W.,
Schultz S.,
Wagner A.F.;
"Structure of peptide deformylase and identification of the substrate binding site.";
J. Biol. Chem. 273:11413-11416(1998).
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[13]
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X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS).
DOI=10.1038/4162; PubMed=9846875 [NCBI, ExPASy, EBI, Israel, Japan]
Becker A.,
Schlichting I.,
Kabsch W.,
Groche D.,
Schultz S.,
Wagner A.F.;
"Iron center, substrate recognition and mechanism of peptide deformylase.";
Nat. Struct. Biol. 5:1053-1058(1998).
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[14]
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X-RAY CRYSTALLOGRAPHY.
DOI=10.1021/bi982594c; PubMed=10200158 [NCBI, ExPASy, EBI, Israel, Japan]
Hao B.,
Gong W.,
Rajagopalan P.T.R.,
Zhou Y.,
Pei D.,
Chan M.K.;
"Structural basis for the design of antibiotics targeting peptide deformylase.";
Biochemistry 38:4712-4719(1999).
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