Rhea SPARQL endpoint

  • Systems Biology
  • Proteins & Proteomes
  • Database
SPARQL access to Rhea, an expert-curated knowledgebase of chemical and transport reactions of biological interest - and the standard for enzyme and transporter annotation in UniProtKB. Rhea uses the ChEBI (Chemical Entities of Biological Interest) ontology to describe reaction participants and their transformations. Rhea reactions are extensively curated with links to source literature and are mapped to other resources e.g. SwissLipids, MetaNetX, Gene Ontology (GO), Reactome and BioCyc.

You might also be interested in

      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    STRING

    Protein-protein interaction networks and enrichment analysis
      • Glycomics
      • Software tool

    Glydin'

    Network representation of known glycan determinants
      • Glycomics
      • Software tool

    EpitopeXtractor

    Compare glycan structures to Glydin' network's collection
      • Proteins & Proteomes
      • Database

    UniProtKB

    Protein sequence database
      • Proteins & Proteomes
      • Lipidomics
      • Database

    SwissLipids

    Knowledge resource for lipids
      • Proteins & Proteomes
      • Systems Biology
      • , Metabolomics
      • Database

    Rhea

    Expert-curated database of biochemical reactions
      • Proteins & Proteomes
      • Database

    ENZYME

    Enzyme nomenclature database
      • Systems Biology
      • , Glycomics
      • Software tool

    HMO-Glycologue

    Simulator of Human Milk Oligosaccharide synthesis
      • Systems Biology
      • Software tool

    OMAMO

    OMAMO allows the user to find the best simple model organism
      • Proteins & Proteomes
      • Systems Biology
      • Database

    TCS

    Predict interaction specificity in bacterial signalling
      • Proteins & Proteomes
      • Structural Biology
      • , Medicinal chemistry
      • Software tool

    SwissDock

    Docking of small ligands into protein active sites
      • Proteins & Proteomes
      • Medicinal chemistry
      • , Structural analysis
      • Software tool

    SwissTargetPrediction

    Target prediction for bioactive small molecules
      • Medicinal chemistry
      • , Structural analysis
      • Software tool

    SwissParam

    Topology and parameters for small molecules
      • Proteins & Proteomes
      • Medicinal chemistry
      • , Structural analysis
      • Database

    SwissBioIsostere

    Database of molecular replacements for ligand design
      • Medicinal chemistry
      • Software tool

    SwissADME

    Pharmacokinetics properties and druglikeness
      • Proteins & Proteomes
      • Database

    VenomZone

    Portal to venom protein UniProtKB entries
      • Proteins & Proteomes
      • Structural Biology
      • , Drug design
      • , Medicinal chemistry
      • , Structural analysis
      • Database

    Click2Drug

    Directory of computational drug design tools
      • Drug design
      • , Medicinal chemistry
      • Database
      • Software tool

    SwissDrugDesign

    Widening access to computer-aided drug design
      • Proteins & Proteomes
      • Glycomics
      • Software tool

    MzJava

    Open source Java class library to process MS fragmentation
      • Metabolomics
      • Software tool

    MSight

    Mass Spectrometry Imager
      • Proteins & Proteomes
      • Systems Biology
      • Database
      • Software tool

    MetaNetX

    Metabolic network repository & analysis
      • Glycomics
      • Software tool

    GlycoDigest

    In silico digestion of glycans by exoglycosidases
      • Proteins & Proteomes
      • Software tool

    PeptideCutter

    Potential cleavage sites in a protein